Usage

Usages on 'Menu', 'Interface' and 'Model are for the standalone program.
Usage on 'Web-Service Developer's Guide' is for web-application program.

Menu

Web-Service Developer's Guide

	Input file
	FSFinder takes GenBank (.gbk) file and Fasta file (.fasta) format as input.

Main menu

	Open FileOpen dialogbox opens. GenBank and Fasta file format can be opened. Open random sequence Dialogbox for random sequence generator opens. Generates a random sequence with the same length as defined by the user. Save result in XML Save the search result of FSFinder as XML.
	Selection details Information window opens or closes. Structures Choose an organism from opened files.
	Find The user can choose a universal model. If 'Find all' is checked, all universal models are displayed. Find Option The user can change and set the universal model. reDraw Return to the default drawing image.
	Move to frame +1 Alternate frames to find frameshift signals in +1 frame. Move to frame -1 Alternate frames to find frameshift signals in -1 frame. Get reverse complement sequence Generate the reverse complementary sequence of the input sequence. Get random sequence Generate a random sequence with the same length as the input sequence. Show a part of the sequence Obtain the sequence with any position and length that the user wants.
	FSFinder help Open help file